Associate Manager Next-Generation Sequencing (NGS) Data Analysis Employer Regeneron Pharmaceuticals, Inc. Location Tarrytown, New York Start date Sep 8, 2026 View more categories View less categories Discipline Information Technology , Bioinformatics Required Education Masters Degree/MBA Position Type Full time Hotbed Pharm Country , Best Places to Work Apply now Save job Click to add the job to your shortlist You need to sign in or create an account to save a job. Send job Job Details Company Job Details The Regeneron Genetic Center's (RGC) Genome Informatics team is looking for an Associate Manager of Sequencing Informatics Research to serve as the lead scientist and developer for the RGCs Sequencing Informatics research initiatives. This individual will contribute to development and design of sequencing informatics methods and protocols for new and existing multi-omics platforms, including PacBio, Illumina, Olink, and Ultima. These efforts will be driven by the goal to maximize value from RGC samples and data. Working closely with the Sequencing & Lab Operations and Production Informatics teams, this role will also assist the methods engagement with RGCs technology partners to on-board new sequencing and informatics platforms and ensure they can meet the RGCs unique scaling and analysis needs. When & where:

Location:

Tarrytown, NY Work model/flexibility: 4 days onsite Discover your role: Lead the integration of state-of-the-art and novel methods to create multi-omics informatics best-practices that increase value from RGC samples by lowering data requirements and leveraging RGCs unique data resources Identify opportunities that combine multiple sequencing modalities (e.g., short-read, long-read, capture, genome, depth-based) to increase the actionability of RGC sequencing deliverables Inform development of novel sequencing informatics protocols to support multi-omics applications on existing and new sequencing platforms, including DNA-seq, RNA-seq, long-read sequencing, and proteomics Support RGCs joint development efforts with technology partners (e.g. NVIDIA, Google Brain) to improve base-calling, read mapping, variant calling and harmonization through bioinformatics R D Collaborate with RGCs Genomics R D, Engineering and Production teams to deploy novel methods into the RGCs Enterprise Research environment as industry-quality software This role requires: Masters (PhD preferred) in Bioinformatics or equivalent 0-3 years of experience in sequencing informatics methodology, including base calling, read mapping, and variant calling algorithms and software. Experience with large-scale multi-omics data types, including DNA-seq (short and long read), RNA-seq, proteomics, methylation. Expert fluency in state-of-the-art bioinformatic tools and standards. Demonstrated engagement in the sequencing bioinformatics community. Experience creating or adapting novel bioinformatic data structures and file formats to improve actionability. Does this sound like you? Apply now to take your first step towards living the Regeneron Way! We are committed to building a workplace with an inclusive culture. Regeneron is an equal opportunity employer and all qualified applicants will receive consideration for employment without regard to race, color, religion or belief (or lack thereof), sex, sexual orientation, gender identity or expression, gender reassignment, marital or civil partnership status, civil status, pregnancy or parental status, age, disability, nationality, citizenship status, ethnic or national origin, membership of the Traveler community, familial status, genetic information, military or veteran status, or any other characteristic protected under applicable law. Where required, we will provide reasonable accommodation to applicants with known disabilities or chronic illnesses during the recruitment process, unless such accommodation would impose undue hardship. Where necessary, we disclose salary ranges for roles in all countries in which we operate. The final offer will be determined within the relevant range based on the country of employment, specific role level, and your skills and experience. In some countries, collective bargaining agreements (CBAs) may apply and influence certain elements of pay or benefits. Regeneron offers a competitive and comprehensive total rewards package which may include, depending on country and role: annual bonuses or other incentive plans, equity awards, pension or retirement benefits, 401(k) company match, health and wellness programs, fitness centers, insurance benefits (e.g. medical, dental, vision, life and disability), paid time off, and family support benefits. For additional information about Regeneron benefits in the U.S., please visit https://careers.regeneron.com/en/working-at-regeneron/total-rewards/ . For other locations, additional information will be provided during the recruitment process. If you have any questions, please speak with your recruiter. Please be advised that at Regeneron, we believe we do our best work when we are together. For that reason, many roles are required to be performed onsite. Please speak with your recruiter and hiring manager for more information about onsite expectations for your role and location. As part of the recruitment process, certain background checks may be conducted in accordance with the laws of the country where the position is based. The purpose of such checks is to verify certain information prior to the commencement of employment such as identity, right to work and educational qualifications. For jobs in

Canada:

this posting is for an existing position. Salary Range (annually) $109,900.00 - $179,300.00 Company Regeneron is a leading biotechnology company that invents, develops, and commercializes life-transforming medicines for people with serious diseases. Founded and led by physician-scientists, our unique ability to repeatedly and consistently translate science into medicine has led to numerous approved treatments and product candidates in development, most of which were homegrown in our laboratories. Our medicines and pipeline are designed to help patients with eye diseases, allergic and inflammatory diseases, cancer, cardiovascular and metabolic diseases, neurological diseases, hematologic conditions, infectious diseases, and rare diseases.

Stock Symbol:

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NASDAQ Company info Website https://www.regeneron.com/ Phone 914-847-7000 Location Corporate Headquarters 777 Old Saw Mill River Road Tarrytown New York 10591 United States Share this job Facebook Twitter LinkedIn Apply now Send job Apply now Save job Click to add the job to your shortlist You need to sign in or create an account to save a job. Get job alerts Create a job alert and receive personalized job recommendations straight to your inbox. Create alert Similar jobs Senior Bioinformatics Engineer II Cambridge, Massachusetts Senior Biologist Indianapolis, Indiana Sr. AI Science Lead San Francisco, California