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Vytwo

Bioinformatics Pipeline Test Engineer - Healthcare - San Diego CA - Local to CA or who can relocate

Pay: Not specified

Posted: 3 weeks ago

Location: Dallas, TX (Onsite)

Last Updated: 2 weeks ago

Hours: Full-Time

Expires: 9/28/2026

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What they do

A Biomedical Engineer designs solutions to problems in medicine and biology to improve patient care. Combines engineering with medical and biological knowledge. May develop medical products designed to replace biological functions, such as prosthetic limbs or artificial hearts, or design equipment such as X-rays and surgical tools.

$91,864 / year median in Texas

+9% projected growth

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Job Description

Bioinformatics Pipeline Test Engineer

Healthcare
San Diego CA
Local to CA or who can relocate Vytwo Dallas, TX Job Details Full-time 18 hours ago Qualifications Public Cloud DevOps automation

Python Full Job Description Title:

Bioinformatics Pipeline Test Engineer Domain:

Healthcare Location:

San Diego, CA

Local to CA or who can relocate

Duration:

Months Experience:

2+ years Must have: Bioinformatics OR Genomics NGS OR \"Next Generation Sequencing\"

VCF OR BAM OR FASTQ

Python Testing

OR QA OR

\"Quality Engineer\"

OR Validation Git Job Description:

Role Overview We are seeking a Bioinformatics Test Engineer to validate and ensure the quality of NGS data pipelines and bioinformatics workflows. The role requires a strong blend of bioinformatics knowledge, QA expertise, and automation skills. Key Responsibilities Design and execute testing strategies for NGS pipelines (alignment, variant calling, annotation) Perform data validation, regression testing, and discrepancy analysis Develop automated test scripts (Python) Translate requirements into test cases and validation criteria Work with CI/CD pipelines and cloud-based workflows Collaborate with cross-functional teams to ensure data accuracy and reliability Required Skills Strong understanding of NGS workflows (FASTQ, BAM, VCF) Experience in bioinformatics pipeline testing or QA Proficiency in Python scripting Hands-on with Git and CI/CD tools Experience with cloud platforms (AWS/GCP/Azure) and data pipelines Strong problem-solving and communication skills Preferred Experience in the biotech/life sciences domain Familiarity with Nextflow, Snakemake, or similar workflows Exposure to regulated environments (CLIA/FDA) What We're Looking For Strong testing mindset + hands-on engineering skills Ability to debug pipelines and explain thought process clearly Experience with real-world data workflows (not just academic projects) Mentions NGS pipelines + testing together Has Python + Git + CI/CD Mentions variant calling / VCF validation Worked on cloud or production pipelines Reject or deprioritize if: Only academic bioinformatics (no testing/QA) Only statistics validation (no system testing) No Python or automation No infra experience (cloud / CI/CD / DB) Only local scripts, no real pipelines Other High Priority Keywords Variant Calling Pipeline Testing Regression Testing Test Strategy OR Test Case Design Data Validation Golden Dataset OR Reference Dataset

CI/CD OR

\"GitHub Actions\" OR GitLab OR \"Azure DevOps\"

AWS OR S3 OR

Cloud Nextflow OR Snakemake

OR WDL OR

Cromwell Automation Testing