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WDL, Nextflow).
MS
Mount Sinai Health System
Bioinformatician III (Statistical Geneticist) - Windreich Department of AI & Human Health Research
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What they do
A Bioinformatician uses computers and software tools to study biology and biology-related data. Conducts studies and maintains biology data; may develop specialized bioinformatics software. Analysis may be used for product development at a pharmaceutical company, disease research at a hospital or health policy research at a public health organization.
$85,511 / year median in New York
+7% projected growth
Job Description
- Job Description
- We are seeking a highly motivated
- genetic epidemiologist/statistical geneticist
- to join a growing genomics and precision medicine research program at the Artificial Intelligence and Human Health Department as
- Bioinformatician III
- Qualifications
- + M.S. in Biological Sciences, Bioinformatics, Computer Sciences, Statistics or related discipline, PhD preferred. + Six years minimum experience required. + Working experience with genetics or statistics analysis software and online resources.
- Preferred
- : • Proficiency in •R•, •Python•, Unix/Linux, Bash scripting Git/GitHub, high-performance computing, and cloud computing environments.
- Strong experience with statistical genetics analysis workflows and tools including REGENIE, PLINK, SAIGE/SAIGE-GENE+, BOLT-LMM, GATK, bcftools/vcftools, FINEMAP/ SuSiE, coloc, PRSice/LDpred/PRS-CS etc.
- Hands-on experience analyzing large-scale
- genomic datasets
- (e.g., WES/WGS, UK Biobank, All of Us, etc.)., and proteomic datasets (e.g., Olink, SomaScan) and associated analysis frameworks.
- Proficiency in
- cloud computing
- environments (e.g. AWS, DNAnexus) and HPC clusters.
- Experience with workflow automation (e.
WDL, Nextflow).
- Proficiency with generating and maintaining reproducible pipelines (Git/GitHub) and experience with machine learning, deep learning large language models (LLMs) and AI applications.
- Responsibilities
- + Design and implement
- large-scale genetic analyses
- , including QC pipelines, GWAS, rare variant association analyses, PRS construction, fine-mapping, proteomics, and integrative genomics.
- About Us
- Strength through Unity and Inclusion
- The Mount Sinai Health System is committed to fostering an environment where everyone can contribute to excellence.
- About the
Mount Sinai Health System:
- Mount Sinai Health System is one of the largest academic medical systems in the New York metro area, with more than 48,000 employees working across eight hospitals, more than 400 outpatient practices, more than 300 labs, a school of nursing, and a leading school of medicine and graduate education.
- Equal Opportunity Employer
- The Mount Sinai Health System is an equal opportunity employer, complying with all applicable federal civil rights laws.
- Compensation Statement
- Mount Sinai Health System (MSHS) provides a salary range to comply with the New York City Law on Salary Transparency in Job Advertisements.